BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G05LP1|AL425919
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig380 1582 0.0
>3x_Contig380
Length = 1539
Score = 1582 bits (798), Expect = 0.0
Identities = 804/806 (99%)
Strand = Plus / Plus
Query: 1 tactataaatactggatgcattccgaccaaattgtacaactattggaccataactctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tactataaatactggatgcattccgaccaaattgtacaactattggaccataactctgtc 697
Query: 61 agagcaaaacttgttggaatcaccgaagattacggcttattgattgccaaggagttgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agagcaaaacttgttggaatcaccgaagattacggcttattgattgccaaggagttgatt 757
Query: 121 gctggaagtaatactcatttcaccggaaatgtttatcatctgcaaccagatggcaatacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gctggaagtaatactcatttcaccggaaatgtttatcatctgcaaccagatggcaatacg 817
Query: 181 tttgacattttcaaaggcttgatatctaaaaaagcctgaaagccatatatattacttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 tttgacattttcaaaggcttgatatctaaaaaagcctgaaagccatatatattacttatt 877
Query: 241 tagccttatagtaccctacagttacagtcaatataatgtggattgtgcattaaattacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tagccttatagtaccctacagttacagtcaatataatgtggattgtgcattaaattacga 937
Query: 301 accttaaaaaaggtagatataaaactatactaaaatacaaggtctgaagatgttcgtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 accttaaaaaaggtagatataaaactatactaaaatacaaggtctgaagatgttcgtctc 997
Query: 361 taaagctttatcgtgaaattttaaattccagaatagaatgaagttcattaatatgttaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 taaagctttatcgtgaaattttaaattccagaatagaatgaagttcattaatatgttaat 1057
Query: 421 gataatctgctgcaattcgcagaaaacataattattctcctgctcacttattttctttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 gataatctgctgcaattcgcagaaaacataattattctcctgctcacttattttctttct 1117
Query: 481 tctcttcgtctgattcttgttgcttaggttcagctggagaataagaaccaggactgtatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 tctcttcgtctgattcttgttgcttaggttcagctggagaataagaaccaggactgtatt 1177
Query: 541 gtggtgaggttggtgagtaagatggagaagtaggggaataggatggtgaggtgggggaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 gtggtgaggttggtgagtaagatggagaagtaggggaataggatggtgaggtgggggaat 1237
Query: 601 aggatggcgatgttggagaataggaaggtgaagtgggagaatatgatggcgatgtaggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 aggatggcgatgttggagaataggaaggtgaagtgggagaatatgatggcgatgtaggag 1297
Query: 661 aatatgaaggagaggttggagagtaggagggtgaagtgggtgaataagatggtgatgtag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 aatatgaaggagaggttggagagtaggagggtgaagtgggtgaataagatggtgatgtag 1357
Query: 721 gagaataagatggtgatgtaggagaataggaaggcgaagttggagaatatgaaggtgatg 780
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1358 gagaataagatggtgatgtaggagaataggaaggcgagtttggagaatatgaaggtgatg 1417
Query: 781 ttggggagtacgatggagatgttggg 806
||||||||||||||||||||||||||
Sbjct: 1418 ttggggagtacgatggagatgttggg 1443
Score = 107 bits (54), Expect = 3e-23
Identities = 159/194 (81%)
Strand = Plus / Plus
Query: 543 ggtgaggttggtgagtaagatggagaagtaggggaataggatggtgaggtgggggaatag 602
||||| || ||||| |||||||| || ||||| ||||| |||||||| || || ||||||
Sbjct: 1327 ggtgaagtgggtgaataagatggtgatgtaggagaataagatggtgatgtaggagaatag 1386
Query: 603 gatggcgatgttggagaataggaaggtgaagtgggagaatatgatggcgatgtaggagaa 662
|| ||||| |||||||||| |||||||| || || || || ||||| ||||| || ||
Sbjct: 1387 gaaggcgagtttggagaatatgaaggtgatgttggggagtacgatggagatgttggggag 1446
Query: 663 tatgaaggagaggttggagagtaggagggtgaagtgggtgaataagatggtgatgtagga 722
||||| || || ||||| |||||||| || || || |||||||| || || |||||||||
Sbjct: 1447 tatgatggcgatgttggtgagtaggatggcgatgttggtgaatacgaaggggatgtagga 1506
Query: 723 gaataagatggtga 736
||||| ||||||||
Sbjct: 1507 gaatatgatggtga 1520
Score = 99.6 bits (50), Expect = 8e-21
Identities = 176/218 (80%)
Strand = Plus / Plus
Query: 546 gaggttggtgagtaagatggagaagtaggggaataggatggtgaggtgggggaataggat 605
|||||||| ||||| || || ||||| || ||||| |||||||| || || ||||| |||
Sbjct: 1309 gaggttggagagtaggagggtgaagtgggtgaataagatggtgatgtaggagaataagat 1368
Query: 606 ggcgatgttggagaataggaaggtgaagtgggagaatatgatggcgatgtaggagaatat 665
|| ||||| |||||||||||||| || | ||||||||||| || ||||| || || ||
Sbjct: 1369 ggtgatgtaggagaataggaaggcgagtttggagaatatgaaggtgatgttggggagtac 1428
Query: 666 gaaggagaggttggagagtaggagggtgaagtgggtgaataagatggtgatgtaggagaa 725
|| ||||| ||||| ||||| || || || || ||||| || ||||| ||||| || |||
Sbjct: 1429 gatggagatgttggggagtatgatggcgatgttggtgagtaggatggcgatgttggtgaa 1488
Query: 726 taagatggtgatgtaggagaataggaaggcgaagttgg 763
|| || || |||||||||||||| || || ||||||||
Sbjct: 1489 tacgaaggggatgtaggagaatatgatggtgaagttgg 1526
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5862
Number of Sequences: 1807
Number of extensions: 5862
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)